Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hif1aQ61221 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Hif1aQ61221 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hif1aQ61221 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.15■□□□□ 0.34
Hif1aQ61221 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.15■□□□□ 0.34
Hif1aQ61221 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Gm15375-201ENSMUST00000119510 849 ntBASIC17.15■□□□□ 0.34
Hif1aQ61221 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.15■□□□□ 0.34
Hif1aQ61221 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.15■□□□□ 0.34
Hif1aQ61221 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Hif1aQ61221 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hif1aQ61221 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hif1aQ61221 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.14■□□□□ 0.33
Hif1aQ61221 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.14■□□□□ 0.33
Hif1aQ61221 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hif1aQ61221 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Hif1aQ61221 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Hif1aQ61221 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hif1aQ61221 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.13■□□□□ 0.33
Hif1aQ61221 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hif1aQ61221 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.12■□□□□ 0.33
Hif1aQ61221 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hif1aQ61221 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Hif1aQ61221 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.12■□□□□ 0.33
Hif1aQ61221 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hif1aQ61221 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hif1aQ61221 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Gm4968-201ENSMUST00000071458 858 ntBASIC17.11■□□□□ 0.33
Hif1aQ61221 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.11■□□□□ 0.33
Hif1aQ61221 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.11■□□□□ 0.33
Hif1aQ61221 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hif1aQ61221 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hif1aQ61221 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hif1aQ61221 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hif1aQ61221 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms