Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Slc6a4Q60857 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Slc6a4Q60857 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Gm13186-201ENSMUST00000118031 316 ntBASIC17.37■□□□□ 0.37
Slc6a4Q60857 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Phf7-203ENSMUST00000226565 1971 ntBASIC17.37■□□□□ 0.37
Slc6a4Q60857 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a4Q60857 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Gm7284-201ENSMUST00000131667 944 ntBASIC17.36■□□□□ 0.37
Slc6a4Q60857 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a4Q60857 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Mir770-201ENSMUST00000103252 94 ntBASIC17.35■□□□□ 0.37
Slc6a4Q60857 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Slc6a4Q60857 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Slc6a4Q60857 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Slc6a4Q60857 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Slc6a4Q60857 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms