Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.76■□□□□ 0.27
Col12a1Q60847 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col12a1Q60847 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Col12a1Q60847 AV026068-213ENSMUST00000223675 1171 ntBASIC16.75■□□□□ 0.27
Col12a1Q60847 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.75■□□□□ 0.27
Col12a1Q60847 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.75■□□□□ 0.27
Col12a1Q60847 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Col12a1Q60847 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 AA543401-201ENSMUST00000164248 1269 ntBASIC16.75■□□□□ 0.27
Col12a1Q60847 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Col12a1Q60847 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Col12a1Q60847 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col12a1Q60847 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Col12a1Q60847 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Col12a1Q60847 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Col12a1Q60847 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.74■□□□□ 0.27
Col12a1Q60847 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.74■□□□□ 0.27
Col12a1Q60847 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Col12a1Q60847 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.73■□□□□ 0.27
Col12a1Q60847 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.73■□□□□ 0.27
Col12a1Q60847 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col12a1Q60847 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col12a1Q60847 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.72■□□□□ 0.27
Col12a1Q60847 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.72■□□□□ 0.27
Col12a1Q60847 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.72■□□□□ 0.27
Col12a1Q60847 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.72■□□□□ 0.27
Col12a1Q60847 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col12a1Q60847 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col12a1Q60847 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col12a1Q60847 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms