Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.19■□□□□ 0.18
Nr1h4Q60641 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nr1h4Q60641 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.18■□□□□ 0.18
Nr1h4Q60641 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nr1h4Q60641 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Gm15375-201ENSMUST00000119510 849 ntBASIC16.17■□□□□ 0.18
Nr1h4Q60641 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Gm6576-201ENSMUST00000169678 883 ntBASIC16.17■□□□□ 0.18
Nr1h4Q60641 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Gm4968-201ENSMUST00000071458 858 ntBASIC16.17■□□□□ 0.18
Nr1h4Q60641 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nr1h4Q60641 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Gm2559-201ENSMUST00000201323 363 ntBASIC16.16■□□□□ 0.18
Nr1h4Q60641 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.16■□□□□ 0.18
Nr1h4Q60641 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.16■□□□□ 0.18
Nr1h4Q60641 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.15■□□□□ 0.18
Nr1h4Q60641 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nr1h4Q60641 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Gm5408-201ENSMUST00000197998 747 ntBASIC16.14■□□□□ 0.17
Nr1h4Q60641 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nr1h4Q60641 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nr1h4Q60641 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms