Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Gm13186-201ENSMUST00000118031 316 ntBASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Olfr129-201ENSMUST00000122318 993 ntBASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Iqck-206ENSMUST00000208658 2891 ntBASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-2Q5R1I4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-2Q5R1I4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Gm24589-201ENSMUST00000116692 94 ntBASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Gm15794-201ENSMUST00000120182 631 ntBASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Gm18115-201ENSMUST00000221209 621 ntBASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-2Q5R1I4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms