Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav5d-4Q5R1F6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5d-4Q5R1F6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Gm37025-201ENSMUST00000195159 829 ntBASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5d-4Q5R1F6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Gm22240-201ENSMUST00000175225 82 ntBASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5d-4Q5R1F6 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5d-4Q5R1F6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms