Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tff1Q08423 Dio3-201ENSMUST00000097228 1449 ntBASIC14.12□□□□□ -0.15
Tff1Q08423 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.12□□□□□ -0.15
Tff1Q08423 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tff1Q08423 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Tff1Q08423 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tff1Q08423 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tff1Q08423 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Gm11643-201ENSMUST00000119578 864 ntBASIC14.11□□□□□ -0.15
Tff1Q08423 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tff1Q08423 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.11□□□□□ -0.15
Tff1Q08423 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tff1Q08423 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tff1Q08423 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.1□□□□□ -0.15
Tff1Q08423 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.1□□□□□ -0.15
Tff1Q08423 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.1□□□□□ -0.15
Tff1Q08423 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Tff1Q08423 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.1□□□□□ -0.15
Tff1Q08423 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Tff1Q08423 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Tff1Q08423 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.09□□□□□ -0.15
Tff1Q08423 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.09□□□□□ -0.15
Tff1Q08423 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Tff1Q08423 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Tff1Q08423 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Tff1Q08423 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Tff1Q08423 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Tff1Q08423 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Gm15378-201ENSMUST00000121894 207 ntBASIC14.08□□□□□ -0.16
Tff1Q08423 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Tff1Q08423 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Tff1Q08423 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Tff1Q08423 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.07□□□□□ -0.16
Tff1Q08423 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Tff1Q08423 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Tff1Q08423 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.07□□□□□ -0.16
Tff1Q08423 Gm11249-201ENSMUST00000117071 859 ntBASIC14.07□□□□□ -0.16
Tff1Q08423 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Tff1Q08423 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms