Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SgcaP82350 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.27□□□□□ -0.13
SgcaP82350 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SgcaP82350 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SgcaP82350 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.26□□□□□ -0.13
SgcaP82350 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.26□□□□□ -0.13
SgcaP82350 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SgcaP82350 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SgcaP82350 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.26□□□□□ -0.13
SgcaP82350 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SgcaP82350 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SgcaP82350 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
SgcaP82350 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SgcaP82350 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SgcaP82350 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.25□□□□□ -0.13
SgcaP82350 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SgcaP82350 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.25□□□□□ -0.13
SgcaP82350 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SgcaP82350 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SgcaP82350 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SgcaP82350 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SgcaP82350 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SgcaP82350 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.24□□□□□ -0.13
SgcaP82350 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Gm13216-201ENSMUST00000117145 591 ntBASIC14.24□□□□□ -0.13
SgcaP82350 Gm13234-201ENSMUST00000120010 747 ntBASIC14.24□□□□□ -0.13
SgcaP82350 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.24□□□□□ -0.13
SgcaP82350 Gm29791-202ENSMUST00000207888 369 ntBASIC14.24□□□□□ -0.13
SgcaP82350 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SgcaP82350 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
SgcaP82350 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SgcaP82350 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SgcaP82350 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SgcaP82350 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.23□□□□□ -0.13
SgcaP82350 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
SgcaP82350 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SgcaP82350 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.23□□□□□ -0.13
SgcaP82350 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SgcaP82350 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.23□□□□□ -0.13
SgcaP82350 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms