Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.14■□□□□ 0.01
SgcbP82349 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Gm16061-201ENSMUST00000122167 857 ntBASIC15.14■□□□□ 0.01
SgcbP82349 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.14■□□□□ 0.01
SgcbP82349 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.14■□□□□ 0.01
SgcbP82349 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.14■□□□□ 0.01
SgcbP82349 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.14■□□□□ 0.01
SgcbP82349 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.14■□□□□ 0.01
SgcbP82349 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SgcbP82349 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SgcbP82349 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.13■□□□□ 0.01
SgcbP82349 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.13■□□□□ 0.01
SgcbP82349 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SgcbP82349 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.13■□□□□ 0.01
SgcbP82349 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SgcbP82349 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
SgcbP82349 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SgcbP82349 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SgcbP82349 Gm45058-201ENSMUST00000205810 766 ntBASIC15.12■□□□□ 0.01
SgcbP82349 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.12■□□□□ 0.01
SgcbP82349 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.12■□□□□ 0.01
SgcbP82349 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SgcbP82349 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SgcbP82349 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SgcbP82349 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SgcbP82349 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.11■□□□□ 0.01
SgcbP82349 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.11■□□□□ 0.01
SgcbP82349 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.11■□□□□ 0.01
SgcbP82349 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.11■□□□□ 0.01
SgcbP82349 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SgcbP82349 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.11■□□□□ 0.01
SgcbP82349 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SgcbP82349 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SgcbP82349 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SgcbP82349 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.1■□□□□ 0.01
SgcbP82349 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SgcbP82349 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SgcbP82349 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.1■□□□□ 0.01
SgcbP82349 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.1■□□□□ 0.01
SgcbP82349 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.1■□□□□ 0.01
SgcbP82349 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SgcbP82349 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SgcbP82349 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SgcbP82349 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.09■□□□□ 0.01
SgcbP82349 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SgcbP82349 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms