Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Six5P70178 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Six5P70178 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.87■□□□□ 0.13
Six5P70178 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Six5P70178 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Six5P70178 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.86■□□□□ 0.13
Six5P70178 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.86■□□□□ 0.13
Six5P70178 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.86■□□□□ 0.13
Six5P70178 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Six5P70178 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Six5P70178 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.86■□□□□ 0.13
Six5P70178 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Six5P70178 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15.85■□□□□ 0.13
Six5P70178 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Gm10252-201ENSMUST00000209541 832 ntBASIC15.85■□□□□ 0.13
Six5P70178 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.85■□□□□ 0.13
Six5P70178 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Six5P70178 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.85■□□□□ 0.13
Six5P70178 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Six5P70178 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Six5P70178 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Six5P70178 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.84■□□□□ 0.13
Six5P70178 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Six5P70178 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Gm18958-201ENSMUST00000174258 762 ntBASIC15.84■□□□□ 0.13
Six5P70178 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six5P70178 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six5P70178 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six5P70178 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six5P70178 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.83■□□□□ 0.13
Six5P70178 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Six5P70178 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.83■□□□□ 0.12
Six5P70178 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Six5P70178 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Six5P70178 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Gm27000-201ENSMUST00000182943 842 ntBASIC15.83■□□□□ 0.12
Six5P70178 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Six5P70178 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.83■□□□□ 0.12
Six5P70178 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six5P70178 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms