Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gm12918-201ENSMUST00000120234 636 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Gm15710-201ENSMUST00000121821 636 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Gm5075-201ENSMUST00000196916 622 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.82■□□□□ 0.28
Crnkl1P63154 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Crnkl1P63154 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Crnkl1P63154 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.81■□□□□ 0.28
Crnkl1P63154 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.81■□□□□ 0.28
Crnkl1P63154 Gm29257-201ENSMUST00000186115 639 ntBASIC16.81■□□□□ 0.28
Crnkl1P63154 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Crnkl1P63154 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Crnkl1P63154 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.8■□□□□ 0.28
Crnkl1P63154 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Crnkl1P63154 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Crnkl1P63154 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Crnkl1P63154 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms