Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.67■□□□□ 0.26
Lhx1P63006 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.67■□□□□ 0.26
Lhx1P63006 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lhx1P63006 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Lhx1P63006 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Lhx1P63006 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.66■□□□□ 0.26
Lhx1P63006 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx1P63006 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.66■□□□□ 0.26
Lhx1P63006 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lhx1P63006 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lhx1P63006 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.65■□□□□ 0.26
Lhx1P63006 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.65■□□□□ 0.26
Lhx1P63006 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Lhx1P63006 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Lhx1P63006 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lhx1P63006 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lhx1P63006 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.65■□□□□ 0.26
Lhx1P63006 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lhx1P63006 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lhx1P63006 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx1P63006 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx1P63006 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Lhx1P63006 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.64■□□□□ 0.25
Lhx1P63006 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Lhx1P63006 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.64■□□□□ 0.25
Lhx1P63006 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.64■□□□□ 0.25
Lhx1P63006 Gm6345-202ENSMUST00000180900 204 ntBASIC16.64■□□□□ 0.25
Lhx1P63006 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.64■□□□□ 0.25
Lhx1P63006 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.64■□□□□ 0.25
Lhx1P63006 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lhx1P63006 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lhx1P63006 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.64■□□□□ 0.25
Lhx1P63006 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lhx1P63006 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.63■□□□□ 0.25
Lhx1P63006 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lhx1P63006 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lhx1P63006 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lhx1P63006 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Gm13186-201ENSMUST00000118031 316 ntBASIC16.63■□□□□ 0.25
Lhx1P63006 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.63■□□□□ 0.25
Lhx1P63006 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.63■□□□□ 0.25
Lhx1P63006 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms