Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.35■□□□□ 0.37
Ybx1P62960 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ybx1P62960 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.35■□□□□ 0.37
Ybx1P62960 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.35■□□□□ 0.37
Ybx1P62960 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.35■□□□□ 0.37
Ybx1P62960 Mzt1-203ENSMUST00000227948 952 ntBASIC17.35■□□□□ 0.37
Ybx1P62960 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ybx1P62960 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.35■□□□□ 0.37
Ybx1P62960 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.35■□□□□ 0.37
Ybx1P62960 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ybx1P62960 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Ybx1P62960 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Gm11336-201ENSMUST00000118168 334 ntBASIC17.34■□□□□ 0.37
Ybx1P62960 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.34■□□□□ 0.37
Ybx1P62960 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Ybx1P62960 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ybx1P62960 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.34■□□□□ 0.37
Ybx1P62960 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ybx1P62960 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ybx1P62960 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ybx1P62960 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ybx1P62960 Birc2-201ENSMUST00000054878 378 ntBASIC17.34■□□□□ 0.37
Ybx1P62960 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ybx1P62960 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ybx1P62960 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.34■□□□□ 0.37
Ybx1P62960 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ybx1P62960 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.33■□□□□ 0.37
Ybx1P62960 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.33■□□□□ 0.37
Ybx1P62960 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Ybx1P62960 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ybx1P62960 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ybx1P62960 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ybx1P62960 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ybx1P62960 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.33■□□□□ 0.36
Ybx1P62960 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Ybx1P62960 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ybx1P62960 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ybx1P62960 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Phf7-203ENSMUST00000226565 1971 ntBASIC17.32■□□□□ 0.36
Ybx1P62960 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.32■□□□□ 0.36
Ybx1P62960 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.32■□□□□ 0.36
Ybx1P62960 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.32■□□□□ 0.36
Ybx1P62960 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.32■□□□□ 0.36
Ybx1P62960 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ybx1P62960 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ybx1P62960 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ybx1P62960 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.31■□□□□ 0.36
Ybx1P62960 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.31■□□□□ 0.36
Ybx1P62960 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ybx1P62960 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.31■□□□□ 0.36
Ybx1P62960 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms