Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Lmo4P61969 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Lmo4P61969 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Lmo4P61969 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.7□□□□□ -0.22
Lmo4P61969 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Lmo4P61969 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lmo4P61969 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.7□□□□□ -0.22
Lmo4P61969 Gm18421-201ENSMUST00000204122 625 ntBASIC13.7□□□□□ -0.22
Lmo4P61969 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Lmo4P61969 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Lmo4P61969 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Lmo4P61969 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Lmo4P61969 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Lmo4P61969 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lmo4P61969 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.69□□□□□ -0.22
Lmo4P61969 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Lmo4P61969 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.69□□□□□ -0.22
Lmo4P61969 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lmo4P61969 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lmo4P61969 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.69□□□□□ -0.22
Lmo4P61969 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Lmo4P61969 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.68□□□□□ -0.22
Lmo4P61969 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.68□□□□□ -0.22
Lmo4P61969 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.68□□□□□ -0.22
Lmo4P61969 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.68□□□□□ -0.22
Lmo4P61969 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lmo4P61969 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.68□□□□□ -0.22
Lmo4P61969 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lmo4P61969 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.68□□□□□ -0.22
Lmo4P61969 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.68□□□□□ -0.22
Lmo4P61969 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Lmo4P61969 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lmo4P61969 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Lmo4P61969 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.67□□□□□ -0.22
Lmo4P61969 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Lmo4P61969 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.67□□□□□ -0.22
Lmo4P61969 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Lmo4P61969 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lmo4P61969 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Lmo4P61969 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.66□□□□□ -0.22
Lmo4P61969 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lmo4P61969 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms