Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sssca1P56873 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sssca1P56873 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.74□□□□□ -0.21
Sssca1P56873 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC13.74□□□□□ -0.21
Sssca1P56873 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.73□□□□□ -0.21
Sssca1P56873 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.73□□□□□ -0.21
Sssca1P56873 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.73□□□□□ -0.21
Sssca1P56873 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.73□□□□□ -0.21
Sssca1P56873 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sssca1P56873 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sssca1P56873 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Sssca1P56873 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Gm10849-201ENSMUST00000100397 618 ntBASIC13.72□□□□□ -0.21
Sssca1P56873 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sssca1P56873 Gm42569-201ENSMUST00000200539 472 ntBASIC13.72□□□□□ -0.21
Sssca1P56873 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.72□□□□□ -0.21
Sssca1P56873 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sssca1P56873 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sssca1P56873 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.72□□□□□ -0.21
Sssca1P56873 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sssca1P56873 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sssca1P56873 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sssca1P56873 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sssca1P56873 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.71□□□□□ -0.21
Sssca1P56873 Gm26571-201ENSMUST00000181399 666 ntBASIC13.71□□□□□ -0.21
Sssca1P56873 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.71□□□□□ -0.21
Sssca1P56873 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.71□□□□□ -0.21
Sssca1P56873 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sssca1P56873 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.71□□□□□ -0.22
Sssca1P56873 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sssca1P56873 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sssca1P56873 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sssca1P56873 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.7□□□□□ -0.22
Sssca1P56873 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Sssca1P56873 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.7□□□□□ -0.22
Sssca1P56873 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.7□□□□□ -0.22
Sssca1P56873 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sssca1P56873 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.7□□□□□ -0.22
Sssca1P56873 Gm13148-201ENSMUST00000118892 745 ntBASIC13.7□□□□□ -0.22
Sssca1P56873 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.7□□□□□ -0.22
Sssca1P56873 Mir5133-201ENSMUST00000174955 77 ntBASIC13.7□□□□□ -0.22
Sssca1P56873 Gm10138-203ENSMUST00000206952 366 ntBASIC13.7□□□□□ -0.22
Sssca1P56873 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sssca1P56873 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms