Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Gm15039-201ENSMUST00000118914 875 ntBASIC14.09□□□□□ -0.15
Nkx2-1P50220 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.09□□□□□ -0.15
Nkx2-1P50220 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-1P50220 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-1P50220 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-1P50220 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-1P50220 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nkx2-1P50220 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Gm38285-201ENSMUST00000192928 922 ntBASIC14.08□□□□□ -0.16
Nkx2-1P50220 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.08□□□□□ -0.16
Nkx2-1P50220 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.07□□□□□ -0.16
Nkx2-1P50220 Gm42569-201ENSMUST00000200539 472 ntBASIC14.07□□□□□ -0.16
Nkx2-1P50220 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx2-1P50220 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx2-1P50220 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms