Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.21■□□□□ 0.19
Sox18P43680 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.21■□□□□ 0.19
Sox18P43680 Gm29791-202ENSMUST00000207888 369 ntBASIC16.21■□□□□ 0.19
Sox18P43680 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Sox18P43680 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sox18P43680 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Sox18P43680 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sox18P43680 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Sox18P43680 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox18P43680 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sox18P43680 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox18P43680 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sox18P43680 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Sox18P43680 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox18P43680 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Sox18P43680 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.2■□□□□ 0.18
Sox18P43680 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.2■□□□□ 0.18
Sox18P43680 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.2■□□□□ 0.18
Sox18P43680 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sox18P43680 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Sox18P43680 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Sox18P43680 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.19■□□□□ 0.18
Sox18P43680 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox18P43680 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Sox18P43680 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sox18P43680 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.18■□□□□ 0.18
Sox18P43680 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.18■□□□□ 0.18
Sox18P43680 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.18■□□□□ 0.18
Sox18P43680 Gm27702-201ENSMUST00000184512 56 ntBASIC16.18■□□□□ 0.18
Sox18P43680 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox18P43680 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.18■□□□□ 0.18
Sox18P43680 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sox18P43680 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sox18P43680 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox18P43680 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.17■□□□□ 0.18
Sox18P43680 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.17■□□□□ 0.18
Sox18P43680 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sox18P43680 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sox18P43680 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms