Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hmx3P42581 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.18□□□□□ -0.14
Hmx3P42581 Gm6365-201ENSMUST00000054711 744 ntBASIC14.18□□□□□ -0.14
Hmx3P42581 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hmx3P42581 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Hmx3P42581 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hmx3P42581 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.18□□□□□ -0.14
Hmx3P42581 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.17□□□□□ -0.14
Hmx3P42581 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hmx3P42581 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.17□□□□□ -0.14
Hmx3P42581 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hmx3P42581 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hmx3P42581 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hmx3P42581 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.16□□□□□ -0.14
Hmx3P42581 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hmx3P42581 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hmx3P42581 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.16□□□□□ -0.14
Hmx3P42581 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hmx3P42581 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmx3P42581 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.15□□□□□ -0.14
Hmx3P42581 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hmx3P42581 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Gm22325-201ENSMUST00000158904 308 ntBASIC14.15□□□□□ -0.14
Hmx3P42581 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.15□□□□□ -0.14
Hmx3P42581 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hmx3P42581 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.15□□□□□ -0.15
Hmx3P42581 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmx3P42581 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmx3P42581 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Hmx3P42581 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Hmx3P42581 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmx3P42581 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmx3P42581 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hmx3P42581 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms