Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Tgds-204ENSMUST00000228543 1594 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Abca1P41233 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Gm11950-201ENSMUST00000121615 838 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Abca1P41233 Mir3081-201ENSMUST00000175305 84 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Gm7213-201ENSMUST00000215977 950 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Abca1P41233 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Abca1P41233 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.03□□□□□ -0.16
Abca1P41233 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.03□□□□□ -0.16
Abca1P41233 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.03□□□□□ -0.16
Abca1P41233 Olfr129-201ENSMUST00000122318 993 ntBASIC14.03□□□□□ -0.16
Abca1P41233 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Abca1P41233 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Gm37025-201ENSMUST00000195159 829 ntBASIC14.03□□□□□ -0.16
Abca1P41233 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.03□□□□□ -0.16
Abca1P41233 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.03□□□□□ -0.16
Abca1P41233 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Abca1P41233 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.02□□□□□ -0.16
Abca1P41233 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abca1P41233 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.02□□□□□ -0.16
Abca1P41233 Gm18958-201ENSMUST00000174258 762 ntBASIC14.02□□□□□ -0.16
Abca1P41233 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.02□□□□□ -0.16
Abca1P41233 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.02□□□□□ -0.16
Abca1P41233 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.02□□□□□ -0.16
Abca1P41233 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abca1P41233 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abca1P41233 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abca1P41233 Gm10566-201ENSMUST00000086739 996 ntBASIC14.02□□□□□ -0.16
Abca1P41233 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Abca1P41233 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.02□□□□□ -0.17
Abca1P41233 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Abca1P41233 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.02□□□□□ -0.17
Abca1P41233 Gm34391-201ENSMUST00000203706 907 ntBASIC14.02□□□□□ -0.17
Abca1P41233 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Abca1P41233 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Abca1P41233 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Abca1P41233 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.01□□□□□ -0.17
Abca1P41233 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Abca1P41233 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Abca1P41233 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Abca1P41233 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Abca1P41233 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Abca1P41233 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms