Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RxrbP28704 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
RxrbP28704 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.06■□□□□ 0.32
RxrbP28704 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RxrbP28704 Gm13148-201ENSMUST00000118892 745 ntBASIC17.06■□□□□ 0.32
RxrbP28704 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RxrbP28704 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RxrbP28704 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.06■□□□□ 0.32
RxrbP28704 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RxrbP28704 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.05■□□□□ 0.32
RxrbP28704 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RxrbP28704 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RxrbP28704 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.05■□□□□ 0.32
RxrbP28704 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RxrbP28704 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RxrbP28704 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.05■□□□□ 0.32
RxrbP28704 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RxrbP28704 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RxrbP28704 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RxrbP28704 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
RxrbP28704 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
RxrbP28704 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RxrbP28704 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RxrbP28704 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.04■□□□□ 0.32
RxrbP28704 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.04■□□□□ 0.32
RxrbP28704 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RxrbP28704 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RxrbP28704 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
RxrbP28704 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RxrbP28704 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.03■□□□□ 0.32
RxrbP28704 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RxrbP28704 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RxrbP28704 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RxrbP28704 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RxrbP28704 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.02■□□□□ 0.32
RxrbP28704 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RxrbP28704 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RxrbP28704 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RxrbP28704 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RxrbP28704 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RxrbP28704 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RxrbP28704 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.01■□□□□ 0.31
RxrbP28704 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RxrbP28704 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms