Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smim1P0C8K7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Prob1-201ENSMUST00000097619 3021 ntBASIC11.74□□□□□ -0.53
Smim1P0C8K7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smim1P0C8K7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smim1P0C8K7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Gm27801-201ENSMUST00000184174 223 ntBASIC11.72□□□□□ -0.53
Smim1P0C8K7 Gm29791-202ENSMUST00000207888 369 ntBASIC11.72□□□□□ -0.53
Smim1P0C8K7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.72□□□□□ -0.53
Smim1P0C8K7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.72□□□□□ -0.53
Smim1P0C8K7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smim1P0C8K7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim1P0C8K7 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim1P0C8K7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smim1P0C8K7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms