Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P04214 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
P04214 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.74■□□□□ 0.43
P04214 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
P04214 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
P04214 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.74■□□□□ 0.43
P04214 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.74■□□□□ 0.43
P04214 Mir5126-201ENSMUST00000175513 77 ntBASIC17.74■□□□□ 0.43
P04214 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.74■□□□□ 0.43
P04214 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.74■□□□□ 0.43
P04214 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.74■□□□□ 0.43
P04214 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P04214 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
P04214 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.74■□□□□ 0.43
P04214 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
P04214 Gm11779-201ENSMUST00000118541 368 ntBASIC17.73■□□□□ 0.43
P04214 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.73■□□□□ 0.43
P04214 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
P04214 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.73■□□□□ 0.43
P04214 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.73■□□□□ 0.43
P04214 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
P04214 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
P04214 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
P04214 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.72■□□□□ 0.43
P04214 Gm5264-201ENSMUST00000190584 848 ntBASIC17.72■□□□□ 0.43
P04214 Gm2213-201ENSMUST00000197485 688 ntBASIC17.72■□□□□ 0.43
P04214 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
P04214 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P04214 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
P04214 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.71■□□□□ 0.43
P04214 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
P04214 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.71■□□□□ 0.43
P04214 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.71■□□□□ 0.43
P04214 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04214 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P04214 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04214 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04214 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P04214 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P04214 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
P04214 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P04214 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P04214 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms