Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Hoxa3P02831 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Hoxa3P02831 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxa3P02831 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Hoxa3P02831 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hoxa3P02831 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Hoxa3P02831 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.21□□□□□ -0.13
Hoxa3P02831 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.21□□□□□ -0.13
Hoxa3P02831 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Gm23634-201ENSMUST00000175071 91 ntBASIC14.21□□□□□ -0.13
Hoxa3P02831 Mir8112-201ENSMUST00000184382 131 ntBASIC14.21□□□□□ -0.13
Hoxa3P02831 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.21□□□□□ -0.13
Hoxa3P02831 Gm9731-201ENSMUST00000209480 747 ntBASIC14.21□□□□□ -0.13
Hoxa3P02831 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hoxa3P02831 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa3P02831 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Hoxa3P02831 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa3P02831 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hoxa3P02831 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Hoxa3P02831 Gm10013-201ENSMUST00000106074 672 ntBASIC14.2□□□□□ -0.14
Hoxa3P02831 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.2□□□□□ -0.14
Hoxa3P02831 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.2□□□□□ -0.14
Hoxa3P02831 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Il3ra-202ENSMUST00000223589 738 ntBASIC14.2□□□□□ -0.14
Hoxa3P02831 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.2□□□□□ -0.14
Hoxa3P02831 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hoxa3P02831 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Hoxa3P02831 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa3P02831 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Gm16061-201ENSMUST00000122167 857 ntBASIC14.19□□□□□ -0.14
Hoxa3P02831 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.19□□□□□ -0.14
Hoxa3P02831 Gm37025-201ENSMUST00000195159 829 ntBASIC14.19□□□□□ -0.14
Hoxa3P02831 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.19□□□□□ -0.14
Hoxa3P02831 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa3P02831 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hoxa3P02831 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hoxa3P02831 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hoxa3P02831 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.18□□□□□ -0.14
Hoxa3P02831 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms