Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Abcd4O89016 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Abcd4O89016 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Abcd4O89016 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Abcd4O89016 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Abcd4O89016 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Abcd4O89016 Gm37025-201ENSMUST00000195159 829 ntBASIC15.34■□□□□ 0.05
Abcd4O89016 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Abcd4O89016 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Abcd4O89016 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Abcd4O89016 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Abcd4O89016 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.33■□□□□ 0.04
Abcd4O89016 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.33■□□□□ 0.04
Abcd4O89016 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.33■□□□□ 0.04
Abcd4O89016 Gm22697-201ENSMUST00000175194 63 ntBASIC15.33■□□□□ 0.04
Abcd4O89016 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.33■□□□□ 0.04
Abcd4O89016 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.33■□□□□ 0.04
Abcd4O89016 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Abcd4O89016 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Abcd4O89016 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.32■□□□□ 0.04
Abcd4O89016 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.32■□□□□ 0.04
Abcd4O89016 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Abcd4O89016 AA414768-201ENSMUST00000121924 1257 ntBASIC15.32■□□□□ 0.04
Abcd4O89016 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm9731-201ENSMUST00000209480 747 ntBASIC15.32■□□□□ 0.04
Abcd4O89016 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm7791-201ENSMUST00000219066 539 ntBASIC15.32■□□□□ 0.04
Abcd4O89016 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm7367-201ENSMUST00000057611 492 ntBASIC15.32■□□□□ 0.04
Abcd4O89016 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Abcd4O89016 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.32■□□□□ 0.04
Abcd4O89016 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Abcd4O89016 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Abcd4O89016 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Abcd4O89016 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Abcd4O89016 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.31■□□□□ 0.04
Abcd4O89016 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.31■□□□□ 0.04
Abcd4O89016 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.31■□□□□ 0.04
Abcd4O89016 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.31■□□□□ 0.04
Abcd4O89016 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Abcd4O89016 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms