Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm24513-201ENSMUST00000174964 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44357-201ENSMUST00000195897 142 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm19658-201ENSMUST00000196231 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44367-201ENSMUST00000196836 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44350-201ENSMUST00000197197 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44390-201ENSMUST00000197533 144 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44313-201ENSMUST00000198018 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44486-201ENSMUST00000198508 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44454-201ENSMUST00000198541 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44314-201ENSMUST00000199263 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44394-201ENSMUST00000199558 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44484-201ENSMUST00000199873 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44466-201ENSMUST00000200264 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm44359-201ENSMUST00000200671 138 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.42■□□□□ 0.38
Syn1O88935 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.42■□□□□ 0.38
Syn1O88935 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.42■□□□□ 0.38
Syn1O88935 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Syn1O88935 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Syn1O88935 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Syn1O88935 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.41■□□□□ 0.38
Syn1O88935 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Syn1O88935 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Syn1O88935 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Syn1O88935 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Syn1O88935 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
Syn1O88935 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Syn1O88935 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.4■□□□□ 0.38
Syn1O88935 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Syn1O88935 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Syn1O88935 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Syn1O88935 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Syn1O88935 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Syn1O88935 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syn1O88935 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syn1O88935 Mir5126-201ENSMUST00000175513 77 ntBASIC17.39■□□□□ 0.37
Syn1O88935 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.39■□□□□ 0.37
Syn1O88935 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Syn1O88935 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.39■□□□□ 0.37
Syn1O88935 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syn1O88935 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.39■□□□□ 0.37
Syn1O88935 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Syn1O88935 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Syn1O88935 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Syn1O88935 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.38■□□□□ 0.37
Syn1O88935 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Syn1O88935 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Syn1O88935 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.38■□□□□ 0.37
Syn1O88935 Gm27867-201ENSMUST00000184778 125 ntBASIC17.38■□□□□ 0.37
Syn1O88935 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.38■□□□□ 0.37
Syn1O88935 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Psmb5-202ENSMUST00000227257 622 ntBASIC17.38■□□□□ 0.37
Syn1O88935 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Syn1O88935 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms