Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.02□□□□□ -0.49
Sh2d1aO88890 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.02□□□□□ -0.49
Sh2d1aO88890 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Sh2d1aO88890 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sh2d1aO88890 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Gm10653-202ENSMUST00000139570 835 ntBASIC12.01□□□□□ -0.49
Sh2d1aO88890 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.01□□□□□ -0.49
Sh2d1aO88890 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh2d1aO88890 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sh2d1aO88890 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12□□□□□ -0.49
Sh2d1aO88890 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sh2d1aO88890 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC12□□□□□ -0.49
Sh2d1aO88890 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 H2-K2-201ENSMUST00000174250 1049 ntBASIC12□□□□□ -0.49
Sh2d1aO88890 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Sh2d1aO88890 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh2d1aO88890 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.99□□□□□ -0.49
Sh2d1aO88890 Gm37292-201ENSMUST00000192062 758 ntBASIC11.99□□□□□ -0.49
Sh2d1aO88890 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms