Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DcxO88809 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DcxO88809 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
DcxO88809 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
DcxO88809 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.39■□□□□ 0.53
DcxO88809 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.39■□□□□ 0.53
DcxO88809 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DcxO88809 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DcxO88809 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DcxO88809 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
DcxO88809 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DcxO88809 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.38■□□□□ 0.53
DcxO88809 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DcxO88809 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.38■□□□□ 0.53
DcxO88809 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.38■□□□□ 0.53
DcxO88809 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.38■□□□□ 0.53
DcxO88809 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Gm10060-201ENSMUST00000212002 111 ntBASIC18.38■□□□□ 0.53
DcxO88809 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DcxO88809 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DcxO88809 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.38■□□□□ 0.53
DcxO88809 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
DcxO88809 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DcxO88809 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
DcxO88809 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.37■□□□□ 0.53
DcxO88809 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.37■□□□□ 0.53
DcxO88809 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.37■□□□□ 0.53
DcxO88809 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
DcxO88809 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
DcxO88809 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DcxO88809 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
DcxO88809 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.36■□□□□ 0.53
DcxO88809 Auts2-212ENSMUST00000178555 309 ntBASIC18.36■□□□□ 0.53
DcxO88809 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.36■□□□□ 0.53
DcxO88809 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.36■□□□□ 0.53
DcxO88809 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.36■□□□□ 0.53
DcxO88809 Gm5186-201ENSMUST00000218781 920 ntBASIC18.36■□□□□ 0.53
DcxO88809 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.36■□□□□ 0.53
DcxO88809 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.36■□□□□ 0.53
DcxO88809 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DcxO88809 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DcxO88809 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DcxO88809 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DcxO88809 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
DcxO88809 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.35■□□□□ 0.53
DcxO88809 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.35■□□□□ 0.53
DcxO88809 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.35■□□□□ 0.53
DcxO88809 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.35■□□□□ 0.53
DcxO88809 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DcxO88809 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DcxO88809 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DcxO88809 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.34■□□□□ 0.53
DcxO88809 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.34■□□□□ 0.53
DcxO88809 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.34■□□□□ 0.53
DcxO88809 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DcxO88809 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms