Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slc28a2O88627 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc28a2O88627 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.1■□□□□ 0.01
Slc28a2O88627 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc28a2O88627 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc28a2O88627 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc28a2O88627 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Trmt13-210ENSMUST00000198454 880 ntBASIC15.09■□□□□ 0.01
Slc28a2O88627 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Slc28a2O88627 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc28a2O88627 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.08■□□□□ 0.01
Slc28a2O88627 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Slc28a2O88627 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Slc28a2O88627 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Gm18666-201ENSMUST00000190039 958 ntBASIC15.08■□□□□ 0
Slc28a2O88627 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.08■□□□□ 0
Slc28a2O88627 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Slc28a2O88627 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.08■□□□□ 0
Slc28a2O88627 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Slc28a2O88627 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.07■□□□□ 0
Slc28a2O88627 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.07■□□□□ 0
Slc28a2O88627 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.07■□□□□ 0
Slc28a2O88627 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.07■□□□□ 0
Slc28a2O88627 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Slc28a2O88627 Dancr-204ENSMUST00000132389 2347 ntBASIC15.06■□□□□ 0
Slc28a2O88627 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Slc28a2O88627 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Slc28a2O88627 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Slc28a2O88627 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.06■□□□□ 0
Slc28a2O88627 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Slc28a2O88627 Gm11643-201ENSMUST00000119578 864 ntBASIC15.06■□□□□ 0
Slc28a2O88627 Gm37856-201ENSMUST00000191634 999 ntBASIC15.06■□□□□ 0
Slc28a2O88627 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.06■□□□□ 0
Slc28a2O88627 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Slc28a2O88627 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.06■□□□□ 0
Slc28a2O88627 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms