Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.27■□□□□ 0.36
Usp2O88623 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp2O88623 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp2O88623 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp2O88623 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp2O88623 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp2O88623 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Usp2O88623 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Phf7-203ENSMUST00000226565 1971 ntBASIC17.26■□□□□ 0.35
Usp2O88623 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp2O88623 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.26■□□□□ 0.35
Usp2O88623 Gm9013-201ENSMUST00000132939 882 ntBASIC17.26■□□□□ 0.35
Usp2O88623 Gm29518-201ENSMUST00000190858 372 ntBASIC17.26■□□□□ 0.35
Usp2O88623 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp2O88623 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp2O88623 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Usp2O88623 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Usp2O88623 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp2O88623 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp2O88623 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp2O88623 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.25■□□□□ 0.35
Usp2O88623 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp2O88623 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.25■□□□□ 0.35
Usp2O88623 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Gm17808-201ENSMUST00000200859 894 ntBASIC17.25■□□□□ 0.35
Usp2O88623 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Usp2O88623 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Usp2O88623 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Usp2O88623 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp2O88623 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Usp2O88623 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp2O88623 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.24■□□□□ 0.35
Usp2O88623 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Usp2O88623 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Usp2O88623 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp2O88623 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Usp2O88623 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Gm13186-201ENSMUST00000118031 316 ntBASIC17.23■□□□□ 0.35
Usp2O88623 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.23■□□□□ 0.35
Usp2O88623 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Usp2O88623 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.22■□□□□ 0.35
Usp2O88623 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.22■□□□□ 0.35
Usp2O88623 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.22■□□□□ 0.35
Usp2O88623 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Mir770-201ENSMUST00000103252 94 ntBASIC17.22■□□□□ 0.35
Usp2O88623 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Gm7284-201ENSMUST00000131667 944 ntBASIC17.22■□□□□ 0.35
Usp2O88623 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Usp2O88623 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Usp2O88623 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms