Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Ttc3O88196 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.75■□□□□ 0.43
Ttc3O88196 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.75■□□□□ 0.43
Ttc3O88196 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.75■□□□□ 0.43
Ttc3O88196 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Ttc3O88196 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ttc3O88196 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ttc3O88196 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.74■□□□□ 0.43
Ttc3O88196 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.74■□□□□ 0.43
Ttc3O88196 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.74■□□□□ 0.43
Ttc3O88196 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.74■□□□□ 0.43
Ttc3O88196 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
Ttc3O88196 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Ttc3O88196 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.74■□□□□ 0.43
Ttc3O88196 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.74■□□□□ 0.43
Ttc3O88196 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.74■□□□□ 0.43
Ttc3O88196 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.74■□□□□ 0.43
Ttc3O88196 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ttc3O88196 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.73■□□□□ 0.43
Ttc3O88196 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.73■□□□□ 0.43
Ttc3O88196 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.73■□□□□ 0.43
Ttc3O88196 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.73■□□□□ 0.43
Ttc3O88196 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ttc3O88196 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ttc3O88196 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ttc3O88196 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ttc3O88196 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ttc3O88196 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Ttc3O88196 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.72■□□□□ 0.43
Ttc3O88196 Gm7461-201ENSMUST00000058918 827 ntBASIC17.72■□□□□ 0.43
Ttc3O88196 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Ttc3O88196 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ttc3O88196 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ttc3O88196 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.71■□□□□ 0.43
Ttc3O88196 Gm27459-201ENSMUST00000184860 107 ntBASIC17.71■□□□□ 0.43
Ttc3O88196 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ttc3O88196 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ttc3O88196 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.71■□□□□ 0.43
Ttc3O88196 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ttc3O88196 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.7■□□□□ 0.42
Ttc3O88196 Birc2-201ENSMUST00000054878 378 ntBASIC17.7■□□□□ 0.42
Ttc3O88196 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.7■□□□□ 0.42
Ttc3O88196 Gm10052-201ENSMUST00000168019 960 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms