Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Gm13312-201ENSMUST00000119631 718 ntBASIC21.99■■□□□ 1.11
Ubr1O70481 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.99■■□□□ 1.11
Ubr1O70481 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Ubr1O70481 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubr1O70481 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.99■■□□□ 1.11
Ubr1O70481 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.99■■□□□ 1.11
Ubr1O70481 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ubr1O70481 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.99■■□□□ 1.11
Ubr1O70481 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC21.98■■□□□ 1.11
Ubr1O70481 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.98■■□□□ 1.11
Ubr1O70481 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubr1O70481 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.98■■□□□ 1.11
Ubr1O70481 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ubr1O70481 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ubr1O70481 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Ubr1O70481 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.97■■□□□ 1.11
Ubr1O70481 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ubr1O70481 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubr1O70481 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC21.97■■□□□ 1.11
Ubr1O70481 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.97■■□□□ 1.11
Ubr1O70481 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
Ubr1O70481 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.97■■□□□ 1.11
Ubr1O70481 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.96■■□□□ 1.11
Ubr1O70481 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Ubr1O70481 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.96■■□□□ 1.11
Ubr1O70481 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC21.96■■□□□ 1.11
Ubr1O70481 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.96■■□□□ 1.11
Ubr1O70481 Gm43514-201ENSMUST00000198852 424 ntBASIC21.96■■□□□ 1.11
Ubr1O70481 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.96■■□□□ 1.11
Ubr1O70481 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.96■■□□□ 1.11
Ubr1O70481 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ubr1O70481 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubr1O70481 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC21.95■■□□□ 1.1
Ubr1O70481 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC21.95■■□□□ 1.1
Ubr1O70481 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
Ubr1O70481 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.95■■□□□ 1.1
Ubr1O70481 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ubr1O70481 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.95■■□□□ 1.1
Ubr1O70481 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubr1O70481 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Gm27525-201ENSMUST00000184465 107 ntBASIC21.94■■□□□ 1.1
Ubr1O70481 AC138767.1-201ENSMUST00000222661 415 ntBASIC21.94■■□□□ 1.1
Ubr1O70481 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubr1O70481 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ubr1O70481 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.93■■□□□ 1.1
Ubr1O70481 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC21.93■■□□□ 1.1
Ubr1O70481 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.93■■□□□ 1.1
Ubr1O70481 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.93■■□□□ 1.1
Ubr1O70481 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubr1O70481 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.92■■□□□ 1.1
Ubr1O70481 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr1O70481 Gm9449-201ENSMUST00000207265 1011 ntBASIC21.92■■□□□ 1.1
Ubr1O70481 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr1O70481 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr1O70481 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubr1O70481 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms