Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tspan6O70401 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Tspan6O70401 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Tspan6O70401 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Tspan6O70401 Gm7153-201ENSMUST00000117092 455 ntBASIC16.53■□□□□ 0.24
Tspan6O70401 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.53■□□□□ 0.24
Tspan6O70401 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.53■□□□□ 0.24
Tspan6O70401 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Gm18115-201ENSMUST00000221209 621 ntBASIC16.53■□□□□ 0.24
Tspan6O70401 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Tspan6O70401 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Tspan6O70401 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.52■□□□□ 0.24
Tspan6O70401 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Tspan6O70401 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Tspan6O70401 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Tspan6O70401 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tspan6O70401 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tspan6O70401 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.51■□□□□ 0.23
Tspan6O70401 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.51■□□□□ 0.23
Tspan6O70401 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Tspan6O70401 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Tspan6O70401 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.51■□□□□ 0.23
Tspan6O70401 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.51■□□□□ 0.23
Tspan6O70401 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tspan6O70401 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tspan6O70401 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.5■□□□□ 0.23
Tspan6O70401 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Olfr129-201ENSMUST00000122318 993 ntBASIC16.5■□□□□ 0.23
Tspan6O70401 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tspan6O70401 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tspan6O70401 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tspan6O70401 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.5■□□□□ 0.23
Tspan6O70401 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.5■□□□□ 0.23
Tspan6O70401 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tspan6O70401 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Phf7-203ENSMUST00000226565 1971 ntBASIC16.49■□□□□ 0.23
Tspan6O70401 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
Tspan6O70401 Gm15794-201ENSMUST00000120182 631 ntBASIC16.49■□□□□ 0.23
Tspan6O70401 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.49■□□□□ 0.23
Tspan6O70401 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.49■□□□□ 0.23
Tspan6O70401 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.49■□□□□ 0.23
Tspan6O70401 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.49■□□□□ 0.23
Tspan6O70401 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tspan6O70401 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms