Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim1O70400 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pdlim1O70400 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.73■□□□□ 0.27
Pdlim1O70400 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim1O70400 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pdlim1O70400 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Mir7071-201ENSMUST00000184847 69 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pdlim1O70400 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.73■□□□□ 0.27
Pdlim1O70400 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.73■□□□□ 0.27
Pdlim1O70400 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pdlim1O70400 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pdlim1O70400 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Gm7213-201ENSMUST00000215977 950 ntBASIC16.72■□□□□ 0.27
Pdlim1O70400 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.72■□□□□ 0.27
Pdlim1O70400 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Haglr-201ENSMUST00000100000 2085 ntBASIC16.72■□□□□ 0.27
Pdlim1O70400 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pdlim1O70400 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.72■□□□□ 0.27
Pdlim1O70400 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Pdlim1O70400 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pdlim1O70400 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pdlim1O70400 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pdlim1O70400 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pdlim1O70400 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Gm10231-201ENSMUST00000181584 441 ntBASIC16.71■□□□□ 0.27
Pdlim1O70400 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Gm10175-202ENSMUST00000208752 441 ntBASIC16.71■□□□□ 0.27
Pdlim1O70400 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Pdlim1O70400 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pdlim1O70400 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pdlim1O70400 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pdlim1O70400 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pdlim1O70400 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pdlim1O70400 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pdlim1O70400 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pdlim1O70400 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Pdlim1O70400 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Actl10-202ENSMUST00000226583 1501 ntBASIC16.7■□□□□ 0.26
Pdlim1O70400 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pdlim1O70400 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.7■□□□□ 0.26
Pdlim1O70400 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pdlim1O70400 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms