Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pja1O55176 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pja1O55176 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pja1O55176 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pja1O55176 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pja1O55176 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.93■□□□□ 0.46
Pja1O55176 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.93■□□□□ 0.46
Pja1O55176 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.93■□□□□ 0.46
Pja1O55176 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pja1O55176 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Gm12382-201ENSMUST00000122005 922 ntBASIC17.92■□□□□ 0.46
Pja1O55176 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.92■□□□□ 0.46
Pja1O55176 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.92■□□□□ 0.46
Pja1O55176 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.92■□□□□ 0.46
Pja1O55176 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.92■□□□□ 0.46
Pja1O55176 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pja1O55176 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Pja1O55176 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pja1O55176 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pja1O55176 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pja1O55176 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pja1O55176 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pja1O55176 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.91■□□□□ 0.46
Pja1O55176 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.91■□□□□ 0.46
Pja1O55176 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Gm10602-201ENSMUST00000098239 609 ntBASIC17.91■□□□□ 0.46
Pja1O55176 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pja1O55176 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Pja1O55176 Gm17661-201ENSMUST00000170317 270 ntBASIC17.9■□□□□ 0.46
Pja1O55176 Gm20049-201ENSMUST00000219950 730 ntBASIC17.9■□□□□ 0.46
Pja1O55176 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pja1O55176 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pja1O55176 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pja1O55176 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pja1O55176 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pja1O55176 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pja1O55176 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pja1O55176 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pja1O55176 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pja1O55176 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.88■□□□□ 0.45
Pja1O55176 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pja1O55176 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.88■□□□□ 0.45
Pja1O55176 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pja1O55176 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.88■□□□□ 0.45
Pja1O55176 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pja1O55176 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms