Protein–RNA interactions for Protein: O55033

Nck2, Cytoplasmic protein NCK2, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck2O55033 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck2O55033 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nck2O55033 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Nck2O55033 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nck2O55033 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nck2O55033 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nck2O55033 Olfr129-201ENSMUST00000122318 993 ntBASIC19.39■□□□□ 0.69
Nck2O55033 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.39■□□□□ 0.69
Nck2O55033 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.39■□□□□ 0.69
Nck2O55033 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Nck2O55033 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nck2O55033 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.38■□□□□ 0.69
Nck2O55033 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Nck2O55033 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Gm5864-201ENSMUST00000202263 970 ntBASIC19.38■□□□□ 0.69
Nck2O55033 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.38■□□□□ 0.69
Nck2O55033 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nck2O55033 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.37■□□□□ 0.69
Nck2O55033 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.37■□□□□ 0.69
Nck2O55033 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.37■□□□□ 0.69
Nck2O55033 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nck2O55033 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.37■□□□□ 0.69
Nck2O55033 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.36■□□□□ 0.69
Nck2O55033 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nck2O55033 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Nck2O55033 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.36■□□□□ 0.69
Nck2O55033 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.36■□□□□ 0.69
Nck2O55033 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.36■□□□□ 0.69
Nck2O55033 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nck2O55033 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.35■□□□□ 0.69
Nck2O55033 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Gm13884-201ENSMUST00000118103 829 ntBASIC19.35■□□□□ 0.69
Nck2O55033 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.35■□□□□ 0.69
Nck2O55033 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nck2O55033 Gm18195-201ENSMUST00000207604 706 ntBASIC19.35■□□□□ 0.69
Nck2O55033 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.35■□□□□ 0.69
Nck2O55033 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.35■□□□□ 0.69
Nck2O55033 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nck2O55033 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nck2O55033 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Nck2O55033 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.34■□□□□ 0.69
Nck2O55033 Gm18733-201ENSMUST00000173950 856 ntBASIC19.34■□□□□ 0.69
Nck2O55033 Gm43347-201ENSMUST00000200226 580 ntBASIC19.34■□□□□ 0.69
Nck2O55033 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nck2O55033 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.34■□□□□ 0.69
Nck2O55033 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms