Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Copb2O55029 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.47■□□□□ 0.71
Copb2O55029 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.47■□□□□ 0.71
Copb2O55029 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Copb2O55029 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Copb2O55029 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.46■□□□□ 0.71
Copb2O55029 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.46■□□□□ 0.71
Copb2O55029 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Copb2O55029 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.46■□□□□ 0.71
Copb2O55029 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Copb2O55029 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Copb2O55029 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.46■□□□□ 0.71
Copb2O55029 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Copb2O55029 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.45■□□□□ 0.7
Copb2O55029 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Copb2O55029 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Copb2O55029 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.44■□□□□ 0.7
Copb2O55029 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.44■□□□□ 0.7
Copb2O55029 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.44■□□□□ 0.7
Copb2O55029 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.44■□□□□ 0.7
Copb2O55029 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Copb2O55029 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.44■□□□□ 0.7
Copb2O55029 Phf7-203ENSMUST00000226565 1971 ntBASIC19.44■□□□□ 0.7
Copb2O55029 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Copb2O55029 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Copb2O55029 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Copb2O55029 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Copb2O55029 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Copb2O55029 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.43■□□□□ 0.7
Copb2O55029 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Copb2O55029 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.43■□□□□ 0.7
Copb2O55029 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.43■□□□□ 0.7
Copb2O55029 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Copb2O55029 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Copb2O55029 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Copb2O55029 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Copb2O55029 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Copb2O55029 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.42■□□□□ 0.7
Copb2O55029 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Copb2O55029 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms