Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nr1i3O35627 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nr1i3O35627 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.21■□□□□ 0.51
Nr1i3O35627 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.21■□□□□ 0.51
Nr1i3O35627 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nr1i3O35627 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nr1i3O35627 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Nr1i3O35627 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nr1i3O35627 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Gm12085-201ENSMUST00000119263 940 ntBASIC18.19■□□□□ 0.5
Nr1i3O35627 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nr1i3O35627 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nr1i3O35627 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nr1i3O35627 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Nr1i3O35627 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Nr1i3O35627 Gm20760-201ENSMUST00000179197 648 ntBASIC18.18■□□□□ 0.5
Nr1i3O35627 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.18■□□□□ 0.5
Nr1i3O35627 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nr1i3O35627 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nr1i3O35627 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Nr1i3O35627 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nr1i3O35627 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms