Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.09■□□□□ 0.49
Clcn6O35454 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Clcn6O35454 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn6O35454 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn6O35454 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn6O35454 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Clcn6O35454 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Clcn6O35454 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Clcn6O35454 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Clcn6O35454 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC18.08■□□□□ 0.48
Clcn6O35454 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm26524-201ENSMUST00000192339 390 ntBASIC18.08■□□□□ 0.48
Clcn6O35454 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.08■□□□□ 0.48
Clcn6O35454 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.08■□□□□ 0.48
Clcn6O35454 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Clcn6O35454 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Clcn6O35454 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Clcn6O35454 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clcn6O35454 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.07■□□□□ 0.48
Clcn6O35454 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC18.07■□□□□ 0.48
Clcn6O35454 Gm43906-201ENSMUST00000203194 906 ntBASIC18.07■□□□□ 0.48
Clcn6O35454 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC18.07■□□□□ 0.48
Clcn6O35454 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 AC116589.4-201ENSMUST00000222390 216 ntBASIC18.07■□□□□ 0.48
Clcn6O35454 AC158981.3-201ENSMUST00000226844 1024 ntBASIC18.07■□□□□ 0.48
Clcn6O35454 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Clcn6O35454 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Clcn6O35454 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Clcn6O35454 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Clcn6O35454 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Clcn6O35454 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Clcn6O35454 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.06■□□□□ 0.48
Clcn6O35454 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC18.06■□□□□ 0.48
Clcn6O35454 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC18.06■□□□□ 0.48
Clcn6O35454 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Clcn6O35454 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Clcn6O35454 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Clcn6O35454 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Clcn6O35454 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn6O35454 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn6O35454 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.05■□□□□ 0.48
Clcn6O35454 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Clcn6O35454 Gm42619-201ENSMUST00000197564 1136 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 Gm5408-201ENSMUST00000197998 747 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 AC163664.1-201ENSMUST00000226251 1248 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Gm4968-201ENSMUST00000071458 858 ntBASIC18.05■□□□□ 0.48
Clcn6O35454 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Clcn6O35454 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms