Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf11aO35305 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf11aO35305 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.23■□□□□ 0.51
Tnfrsf11aO35305 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11aO35305 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Gm45058-201ENSMUST00000205810 766 ntBASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11aO35305 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms