Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.93■□□□□ 0.14
Cx3cl1O35188 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Cx3cl1O35188 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Gm2274-201ENSMUST00000184539 609 ntBASIC15.92■□□□□ 0.14
Cx3cl1O35188 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cx3cl1O35188 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gm7889-201ENSMUST00000185591 958 ntBASIC15.91■□□□□ 0.14
Cx3cl1O35188 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gm9987-201ENSMUST00000069768 567 ntBASIC15.91■□□□□ 0.14
Cx3cl1O35188 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cx3cl1O35188 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cx3cl1O35188 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cx3cl1O35188 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cx3cl1O35188 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms