Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Gm24589-201ENSMUST00000116692 94 ntBASIC14.56□□□□□ -0.08
Casp6O08738 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Casp6O08738 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Casp6O08738 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Casp6O08738 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Casp6O08738 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Casp6O08738 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Casp6O08738 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Casp6O08738 Idnk-204ENSMUST00000226010 1898 ntBASIC14.56□□□□□ -0.08
Casp6O08738 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.56□□□□□ -0.08
Casp6O08738 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Casp6O08738 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Casp6O08738 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Casp6O08738 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Casp6O08738 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Casp6O08738 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.55□□□□□ -0.08
Casp6O08738 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.55□□□□□ -0.08
Casp6O08738 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.55□□□□□ -0.08
Casp6O08738 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Casp6O08738 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Casp6O08738 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Casp6O08738 Mir8112-201ENSMUST00000184382 131 ntBASIC14.55□□□□□ -0.08
Casp6O08738 Gm28659-201ENSMUST00000188013 759 ntBASIC14.55□□□□□ -0.08
Casp6O08738 Gm44771-201ENSMUST00000206975 626 ntBASIC14.55□□□□□ -0.08
Casp6O08738 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Casp6O08738 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Casp6O08738 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Casp6O08738 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.54□□□□□ -0.08
Casp6O08738 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.54□□□□□ -0.08
Casp6O08738 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Casp6O08738 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.54□□□□□ -0.08
Casp6O08738 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.54□□□□□ -0.08
Casp6O08738 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Casp6O08738 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Casp6O08738 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Casp6O08738 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.53□□□□□ -0.08
Casp6O08738 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.53□□□□□ -0.08
Casp6O08738 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.53□□□□□ -0.08
Casp6O08738 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Casp6O08738 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Casp6O08738 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Mzt1-203ENSMUST00000227948 952 ntBASIC14.53□□□□□ -0.08
Casp6O08738 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Casp6O08738 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.52□□□□□ -0.08
Casp6O08738 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Casp6O08738 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.52□□□□□ -0.08
Casp6O08738 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Casp6O08738 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Casp6O08738 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Casp6O08738 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Casp6O08738 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.52□□□□□ -0.09
Casp6O08738 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.52□□□□□ -0.09
Casp6O08738 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms