Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sema3aO08665 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sema3aO08665 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sema3aO08665 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sema3aO08665 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sema3aO08665 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sema3aO08665 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.12■□□□□ 0.33
Sema3aO08665 Gm13474-201ENSMUST00000122466 815 ntBASIC17.12■□□□□ 0.33
Sema3aO08665 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
Sema3aO08665 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.12■□□□□ 0.33
Sema3aO08665 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sema3aO08665 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.11■□□□□ 0.33
Sema3aO08665 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sema3aO08665 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sema3aO08665 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sema3aO08665 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Sema3aO08665 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.1■□□□□ 0.33
Sema3aO08665 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.1■□□□□ 0.33
Sema3aO08665 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sema3aO08665 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.1■□□□□ 0.33
Sema3aO08665 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sema3aO08665 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Sema3aO08665 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.09■□□□□ 0.33
Sema3aO08665 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
Sema3aO08665 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sema3aO08665 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Sema3aO08665 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Gm7370-201ENSMUST00000219471 767 ntBASIC17.09■□□□□ 0.33
Sema3aO08665 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.09■□□□□ 0.33
Sema3aO08665 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sema3aO08665 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.09■□□□□ 0.33
Sema3aO08665 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sema3aO08665 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3aO08665 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3aO08665 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3aO08665 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.08■□□□□ 0.33
Sema3aO08665 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3aO08665 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sema3aO08665 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3aO08665 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3aO08665 Gm6433-201ENSMUST00000118634 875 ntBASIC17.08■□□□□ 0.32
Sema3aO08665 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sema3aO08665 Gm7889-201ENSMUST00000185591 958 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms