Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sh3yl1O08641 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Gm43799-201ENSMUST00000201845 579 ntBASIC16.16■□□□□ 0.18
Sh3yl1O08641 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh3yl1O08641 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.16■□□□□ 0.18
Sh3yl1O08641 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.16■□□□□ 0.18
Sh3yl1O08641 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.15■□□□□ 0.18
Sh3yl1O08641 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.15■□□□□ 0.18
Sh3yl1O08641 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3yl1O08641 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Gm38027-201ENSMUST00000192315 235 ntBASIC16.14■□□□□ 0.17
Sh3yl1O08641 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3yl1O08641 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Gm24841-201ENSMUST00000158676 357 ntBASIC16.13■□□□□ 0.17
Sh3yl1O08641 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3yl1O08641 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms