Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm20708H3BKF4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gm20708H3BKF4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Gm20708H3BKF4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm16061-201ENSMUST00000122167 857 ntBASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm20708H3BKF4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gm45058-201ENSMUST00000205810 766 ntBASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gm9987-201ENSMUST00000069768 567 ntBASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm20708H3BKF4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Actl10-202ENSMUST00000226583 1501 ntBASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.17□□□□□ -0.14
Gm20708H3BKF4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms