Protein–RNA interactions for Protein: H3BJZ2

Cdhr4, Cadherin-related family member 4, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr4H3BJZ2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Gm7370-201ENSMUST00000219471 767 ntBASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cdhr4H3BJZ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cdhr4H3BJZ2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Gm13474-201ENSMUST00000122466 815 ntBASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cdhr4H3BJZ2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.02□□□□□ -0.01
Cdhr4H3BJZ2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cdhr4H3BJZ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Spsb2-203ENSMUST00000112473 1322 ntBASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Cdhr4H3BJZ2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms