Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh1F7BJK1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh1F7BJK1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh1F7BJK1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Gm5408-201ENSMUST00000197998 747 ntBASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh1F7BJK1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh1F7BJK1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh1F7BJK1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh1F7BJK1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh1F7BJK1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh1F7BJK1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh1F7BJK1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms