Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.36□□□□□ -0.11
Cpsf4lE9Q2N0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.35□□□□□ -0.11
Cpsf4lE9Q2N0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf4lE9Q2N0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4lE9Q2N0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Cpsf4lE9Q2N0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4lE9Q2N0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4lE9Q2N0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf4lE9Q2N0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Gm6433-201ENSMUST00000118634 875 ntBASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Gm16061-201ENSMUST00000122167 857 ntBASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf4lE9Q2N0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf4lE9Q2N0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms