Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.14■□□□□ 0.01
Shank1D3YZU1 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.14■□□□□ 0.01
Shank1D3YZU1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Shank1D3YZU1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.13■□□□□ 0.01
Shank1D3YZU1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.13■□□□□ 0.01
Shank1D3YZU1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Shank1D3YZU1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.12■□□□□ 0.01
Shank1D3YZU1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Shank1D3YZU1 Idnk-204ENSMUST00000226010 1898 ntBASIC15.12■□□□□ 0.01
Shank1D3YZU1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.11■□□□□ 0.01
Shank1D3YZU1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm10052-201ENSMUST00000168019 960 ntBASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm7729-201ENSMUST00000050143 801 ntBASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Shank1D3YZU1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Shank1D3YZU1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.1■□□□□ 0.01
Shank1D3YZU1 Gm11594-201ENSMUST00000122313 162 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms