Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh2d4bA6X942 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Gm18958-201ENSMUST00000174258 762 ntBASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sh2d4bA6X942 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4bA6X942 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4bA6X942 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4bA6X942 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4bA6X942 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.14■□□□□ 0.5
Sh2d4bA6X942 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sh2d4bA6X942 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Gm17808-201ENSMUST00000200859 894 ntBASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sh2d4bA6X942 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.13■□□□□ 0.49
Sh2d4bA6X942 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Gm7791-201ENSMUST00000219066 539 ntBASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sh2d4bA6X942 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.12■□□□□ 0.49
Sh2d4bA6X942 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Gm7638-201ENSMUST00000121348 967 ntBASIC18.11■□□□□ 0.49
Sh2d4bA6X942 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sh2d4bA6X942 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms