Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.8□□□□□ -0.2
Chd6A3KFM7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chd6A3KFM7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chd6A3KFM7 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.79□□□□□ -0.2
Chd6A3KFM7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd6A3KFM7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Gm43433-201ENSMUST00000196573 481 ntBASIC13.78□□□□□ -0.2
Chd6A3KFM7 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Chd6A3KFM7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.78□□□□□ -0.2
Chd6A3KFM7 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.78□□□□□ -0.2
Chd6A3KFM7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd6A3KFM7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chd6A3KFM7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.77□□□□□ -0.2
Chd6A3KFM7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.77□□□□□ -0.2
Chd6A3KFM7 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chd6A3KFM7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.77□□□□□ -0.2
Chd6A3KFM7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.77□□□□□ -0.21
Chd6A3KFM7 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.77□□□□□ -0.21
Chd6A3KFM7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Gm37025-201ENSMUST00000195159 829 ntBASIC13.77□□□□□ -0.21
Chd6A3KFM7 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.77□□□□□ -0.21
Chd6A3KFM7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chd6A3KFM7 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gm27494-201ENSMUST00000184735 189 ntBASIC13.76□□□□□ -0.21
Chd6A3KFM7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.76□□□□□ -0.21
Chd6A3KFM7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chd6A3KFM7 Gm10355-201ENSMUST00000097146 517 ntBASIC13.76□□□□□ -0.21
Chd6A3KFM7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.75□□□□□ -0.21
Chd6A3KFM7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chd6A3KFM7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms